Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015934187.1_cds_XP_016480325.1_71774
CDS Infomation

[gene=LOC107801507] [db_xref=GeneID:107801507] [protein=uncharacterized protein LOC107801507 isoform X2] [protein_id=XP_016480325.1] [location=join(45497..45572,47100..47539,49213..49398,49805..49912,50771..50974,51048..52473,52504..52948,53235..53793)] [gbkey=CDS]
Sequence

ATGGAGAGAACTCCATCGGCTTGTGCGATGCAGTGGAGCATTGACCTTGAAAAGGGCCTC
CGTTCTAATAAACCTGAAGCCATACTAGATATTGGGCCAAAACTTGAGTGGTGGAGTAGA
GAGTCAAATCTTAGTGCTGCTGAGTACAAAGTATTCGGCTTAATTCCTGGGGAGGATAAG
CTATTTGCAAATAGTATCCTCCTTAGGCTTGCAGATGCATTTAAGTCAGGGGACAAACAT
ATGAAGCTTTGCATTGTGAAGATTTTCTTGTCCGAGCTCAAGCAGAGGAGGCGATTGAGG
AGCAAGGGGAGAAAAGATAAGGGGATCCTTTCGAAGGATAAATTAGATAGCTATAGAGAA
CTTCTAAGTAGAATAAAGATAGTATTCGACACTGGAGACATTGAAGAGAGAGCATTGGCT
TTAGCTCTATTTGGTTGCTGGGCTCATATTGCAAAAGATAGTGCTGATGTAAGATACCTC
ATCCTTTCAAGCTTGGTGTCTATGCATGTTCCGGAGGCAAAGGCTTCTTTGTTTGCAGCT
GGATGCTTTTCTGAATTGGCGAACGACTTTGCTTATGTATTTCTGGAAATGCTTGGAGGT
CTGCTGATGTCATCTGAAACATCAAGGGTTATAAGGTTAGCAGGAGGACGAGCTTTTGCT
AAAATGTGGTGCTCACTTTTACTAGCGGATAGAGCTCATAAGACTGGTATGAAGCTTATC
CTAGAATCTTCAGAAGAAGACTTCTCGTTGGTGATGCTAGTTTCACTTTCCAAAATTGCT
TCTAAATGGACATCTTTAATTCCTATACAGATGGAACTACTTTTCTTATTTATGGCAAAG
GACAGAGGTTTGAGCCTGCAAGCTTTGGCATTAAAATGCCTCCATTTCATTTTAGCCAAA
GGAGTTTATCACTTCCATGCCAGTTCAAATGTGACTCTAAAGTTGTTTGGTGTCATAAAT
CAGTCTGATTTTCCACCAGCTTTACAGTTTGAAGCTCTAAGAGCTTTATACAAGATGCCG
CTGCCCAACCTGGAGACAATTCCATGCACAGAGATCCTCACTAGTTTCTCCAAGTTCTTA
CAAATTGTTGAGTTCAAACTACATTCTTCAATTATGTCAGAGAGGATTTTATCTGTTCAT
GTATTAGCTAGTATTTCTGACAAGCTTTTGGGAATACCAAAAGATGCAGCTGGTGGAATT
GTTTCAATTGTTGCATCTCGCATGATTACTTTCACCATCGATCGTATCTCCCAACTAATA
AAGTTAGTGGTTGATAATCCTCATCCAAACAAAGAGGCGGAGCAGGAGGTAAAGAGTTTA
CTCTTTATTTTAGTTAATCTGGTCGAAAGACATCGAGATCTCTCTGGTATTGTACTGGAT
AAGATCTGTATAGTTATCGAACATCTGGTTCGCATGCTCAATGAAGTTACCAGCATGGAG
AATTCAGGCTCAGAAGATCATCATATGACAGAGCTCGACAAAGAGAACCATGCATCTACT
GCATCGAGAGTTTTGGTTTGTTTATCCCAGATTCTGATAACTTGCTTTGAAATGCTGGAA
GTTTCCACTGCTGGTGCCACCCAAGTCTTTAACAGAATGGAGCATTTGGTTGAGCATGTG
CACCGGTGCAGCTTACTTCCTGTTTACATCCACCTAATATATCACCTTTTATTGCACTTC
CATGCTGGATATCACTGTATGTGGCTGAAGATAGGGGAAGATACGGTTTCTAATAGAAAT
TTTCGTCTATCTCGTTGTAGTTCTCTGTCAGCTGATGGTTCCCTATCCCAGAATGAAAGT
TTCATTAATGACTGTGTGAAGGAAATTTTGGATAAAAAAGAGTATTGGTCGTCTTATAAG
CTTGGAAAATATGCGGCATGTCATGGTGCATGGTTGGTAGCTGCTTACATATTTGGGGAT
CTAATTCCTATGGTTCGATCTGATATCTGTTGTTTGTGGTTGAAATCCTTATCCCATCTT
TCAGAATTAGAAAGGCAAGTCCAGTTGTTCAGGCTTACTCTTTCTGGAAATACTGCCGGG
GAAACTACGACAGTTAATCAAATTGAAAATGTTGTCGGGGCCTCCAACAAACTTTGTTCT
TTAGAGGAAGCTTTTGGTACCTCTGTTTCTGGTTGTGCTTTTAGTTTCCAGAGATGGTTT
ATTACTATAAGATCAAAGGTTGTTGGAACGGTAGCAGACGTACTTAAATTATTGAGCACA
AATTCGTTTTCAGAAGAAGCCTCCAGAAGTACTGAACGACTAGGGGAAAGGATTTTGGTT
CAGCAGTCAGAATCTTCACAAGGACTCAGCTCTTTGTTGCAATTGCTTGCCCACGCTTCT
TCTCAGCTCATGAGGCTAGCAAGAGAATTTGATCTCTTAGGAGCGTCATTCATTGGCATG
GACAGAAAAAGTATGAAGATAGTTTCTGATCTTGGATTAGGCTGTTCACTATTAGCCTTT
AGTACTGGATTAACATGTCGTTTTGTTAGTTCCCATGGTAAACAAGATTGTAGCATTTAT
GGTCTTGAAACCTCAGAGGAGCAATTTCATACTCTGCTGGTTCATGACTTATTAAGGAGA
CTGGGCTATATAGACTTAGAGACTAGCAAAAATTTACGGCAGCTTTTGGATTTCCGTCGA
AGTTCTAGGAGCTGTTCCATGCAAGAATTCCAAAATGAAATTTCTTCCACTAGTGTTGAA
GCAAGAGATGTTGCTAAACTTTGTAGATATTCTGTTCAGAGATTTCTTAGTTTGCAAGCG
AGTACTGTACATGCCAATACTGGTATATCCCAAATTCCCCGTGATGCTTTGCAGTTGCTG
TTCAACATTATTTTCTTGTGGATACAGATCCCTTTCCGGACTCCCAAACACTTTTTTCGA
TTGAGGCCTCCCATTTCTGCTGAGCTTTTCATAACAAATGAAGCTGGTAAAAGGATAGAT
AATATATCTGTCTTGTCAGGCTTTCAGCTCCCTCTAACTCTGTGCATTCAACTAAGAAAT
ATATTGCCAGATCAGCTGTCTCGGGTGTCGAAGTTGTACTGCATCCTTTGCTCACGAACA
TCCTTTCAAGTATTTAGTGAAAGCGAGGATAAGAAAGTACCAGAGTCCAGTTGTCAGGCT
TGGAAAAGCAATCATATGGTAGACCTTAATGACAAGCTATTGCACTTTACAACAGGGTCT
CCCAAGAGGGGTGGATTACATGCTATGGGAAGTGCTGAAGGGACTTCAGTTGTGGATAAA
TTTGTGTCTTTTGATCCTAATGAGAAAGGGCAAGGATTTGCAACCTGCTTGCTAGATGTT
TCTGCATTTCCTGTGGGTTCTTACCAAATCAAATGGCACAGCTGTTGTATAGACAATAAT
GGTGCTTACTGGAGCCTTACGCCCCTGAACACAGATCAGTTCTTCACTGTACATGAATCT
TCTAATATTGGTCCTTTAGTTTAG

Peptide Sequence

PEP ID

XP_016480325.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107801507 isoform X2 [Nicotiana tabacum]
Sequence

MERTPSACAMQWSIDLEKGLRSNKPEAILDIGPKLEWWSRESNLSAAEYKVFGLIPGEDK
LFANSILLRLADAFKSGDKHMKLCIVKIFLSELKQRRRLRSKGRKDKGILSKDKLDSYRE
LLSRIKIVFDTGDIEERALALALFGCWAHIAKDSADVRYLILSSLVSMHVPEAKASLFAA
GCFSELANDFAYVFLEMLGGLLMSSETSRVIRLAGGRAFAKMWCSLLLADRAHKTGMKLI
LESSEEDFSLVMLVSLSKIASKWTSLIPIQMELLFLFMAKDRGLSLQALALKCLHFILAK
GVYHFHASSNVTLKLFGVINQSDFPPALQFEALRALYKMPLPNLETIPCTEILTSFSKFL
QIVEFKLHSSIMSERILSVHVLASISDKLLGIPKDAAGGIVSIVASRMITFTIDRISQLI
KLVVDNPHPNKEAEQEVKSLLFILVNLVERHRDLSGIVLDKICIVIEHLVRMLNEVTSME
NSGSEDHHMTELDKENHASTASRVLVCLSQILITCFEMLEVSTAGATQVFNRMEHLVEHV
HRCSLLPVYIHLIYHLLLHFHAGYHCMWLKIGEDTVSNRNFRLSRCSSLSADGSLSQNES
FINDCVKEILDKKEYWSSYKLGKYAACHGAWLVAAYIFGDLIPMVRSDICCLWLKSLSHL
SELERQVQLFRLTLSGNTAGETTTVNQIENVVGASNKLCSLEEAFGTSVSGCAFSFQRWF
ITIRSKVVGTVADVLKLLSTNSFSEEASRSTERLGERILVQQSESSQGLSSLLQLLAHAS
SQLMRLAREFDLLGASFIGMDRKSMKIVSDLGLGCSLLAFSTGLTCRFVSSHGKQDCSIY
GLETSEEQFHTLLVHDLLRRLGYIDLETSKNLRQLLDFRRSSRSCSMQEFQNEISSTSVE
ARDVAKLCRYSVQRFLSLQASTVHANTGISQIPRDALQLLFNIIFLWIQIPFRTPKHFFR
LRPPISAELFITNEAGKRIDNISVLSGFQLPLTLCIQLRNILPDQLSRVSKLYCILCSRT
SFQVFSESEDKKVPESSCQAWKSNHMVDLNDKLLHFTTGSPKRGGLHAMGSAEGTSVVDK
FVSFDPNEKGQGFATCLLDVSAFPVGSYQIKWHSCCIDNNGAYWSLTPLNTDQFFTVHES
SNIGPLV

Transcript Sequence

Gene sequence data has not been registered.